Candidate Autism Spectrum Disorder Genes: AGAP1, AGMO, ANKRD11, ANKRD12, ASTN1, ASTN2, AUTS2, B3GALT6, CADPS2, CAP2, CDH10, CDH18, CDH9, CNTN3, CNTN4, CTNND2, DISC1, DLGAP2, DPP10, DPP6, DPYD, FHIT, GABRA5, GABRB1, GABRB3, GABRG1, GALNT13, GRID1, GRIK2, GRIN2A, GRM8, GRPR, JMJD1C, KCNMA1, MDGA2, MET, MTF1, NBEA, NEGR1, NLGN1, NRCAM, PAK7, PARK2, PCDH10, PCDH9, PDE9A, PIP5K1B, PRKAG2, PRKCB, RBFOX1, RFWD2, RNF8, SCN7A, SEMA5A, SHANK2, SLC25A12, SLC4A10, SRPK2, STK3, WDR4. Rare Copy Number Variations: AGAP1, ASTN2, AUTS2, CADPS2, CNTN3, CNTN4, CTNND2, DPP10, DPP6, GABRA5, GALNT13, GRID1, GRM8, MDGA2, NLGN1, PAK7, PARK2, PCDH10, PCDH9, PRKAG2, RFWD2, RNF8, SCN7A. Deletions: AGMO, ANKRD11, B3GALT6, DPYD, FHIT, NBEA, NRXN, PCDH9, RBFOX1, SLC4A10. Duplications: CAP2, DLGAP2, GABRG1, PDE9A, WDR4. Translocation Breakpoint: CDH18, GRPR, KCNMA1, NBEA, NEGR1, PIP5K1B, STK3. Inversion Breakpoint: JMJD1C, SRPK2, GABRG1. Association: AGAP1, CADPS2, CDH10, CDH9, DISC1, GABRB1, GABRB3, GRIK2, GRIN2A, MET, MTF1, NRCAM, PRKCB, SEMA5A, SLC25A12. Linkage: AGAP1, GRIK2, SLC25A12. Paralogues of Other Implicated or Candidate Genes: ANKRD12, ASTN1, DPP10, SHANK2. Behavior, Cognition, Learning & Memory: AFF2, CHD7, CNTNAP2, CTNND2, GABRA5, GRIK2, GRIN2A, GRPR, NF1, NIPBL, NLGN3, NLGN4X, NRXN1, PARK2, SHANK3, TBX1. Central Nervous System Development: AFF2, ATRX, CDKL5, CHD7, CNTN4, CNTNAP2, DISC1, DMD, FMR1, GABRA5, GRIN2A, IL1RAPL1, MDGA2, NF1, NIPBL, NLGN1, NLGN3, NLGN4X, NRCAM, NRXN1, PARK2, PTEN, SHANK3, STK3, TBX1, TSC1, TSC2, UBE3A. Neurogenesis & Axonogenesis: CACNA1C, CAP2, CDKL5, CNTN4, CNTNAP2, DISC1, DMD, GABRA5, GRIN2A, IL1RAPL1, MDGA2, MET, NF1, NLGN1, NLGN3, NRCAM, NRXN1, PTEN, PTPN11, SEMA5A, SHANK3, TSC1. Synaptic Plasticity & Transmission: CADPS2, CNTN4, CNTNAP2, CTNND2, DLGAP2, DMD, DMPK, GABRA5, GABRB1, GABRB3, GABRG1, GRIK2, GRIN2A, GRM8, KCNMA1, NF1, NLGN1, NLGN3, NLGN4X, NRCAM, NRXN1, PARK2, PRKCB, SHANK3, TSC1. Neurotransmitter & Other Receptors: GABRA5, GABRB1, GABRB3, GABRG1, GRID1, GRIK2, GRIN2A, GRM8, MET. Ion Transporters: CACNA1C, KCNMA1, SCN7A, SLC25A12, SLC4A10, SLC6A8, SLC9A9. Cell Adhesion & Cytoskeleton: ASTN1, ASTN2, CAP2, CDH10, CDH18, CDH9, CNTN3, CNTN4, CNTNAP2, CTNND2, DISC1, DLGAP2, DMD, DMPK, NEGR1, NLGN1, NLGN3, NLGN4X, NRCAM, NRXN1, PCDH10, PCDH9, SEMA5A. Anchoring & Scaffolding: NBEA, SHANK2, SHANK3. Intracellular Transport: CADPS2, FGD1, NBEA, VPS13B. Kinases & Phosphatases: CDKL5, DMPK, GRPR, PAK7, PIP5K1B, PRKAG2, PRKCB, PTEN, PTPN11, SRPK2, STK3. Regulation of Transcription & Epigenetics: AFF2, ANKRD11, ANKRD12, ATRX, CHD7, CREBBP, JMJD1C, MECP2, MTF1, NIPBL, NSD1, RAI1, RNF8, TBX1. RNA Binding & Translation: FMR1, RBFOX1, RPL10, WDR4. Small G-Protein Signaling: AGAP1, FGD1, NF1, TSC1, TSC2. Metabolism: ADSL, AGMO, DHCR7, DPYD, FHIT. Glycosylation: B3GALT6, GALNT13. Peptidases: DPP10, DPP6. Ubiquitination: PARK2, RFWD2, UBE3A. Phosphodiesterase: PDE9A. Others: AHI1, AUTS2, C3orf58, IL1RAPL1, MDGA2. |